All Classes

• Abort
• AcknowledgeableMessage
• Align
• AlleleNumber
• AltContig
• AsciiWriter
• AsyncMateResolveWorker
• BED
• BED.1
• BEDToolsCoverage
• BaseCompactor
• BaseCounts
• BatchedAcknowledgeableMessage
• CNVDatabase
• CNVFrequency
• Cli
• CliOptions
• ClinVar
• CompactReadPair
• CompactReadPair.ReadCompressor
• Consanguinity
• Constraint
• CoverageBlock
• CoverageDownsampler
• CoverageGaps
• CoveragePosition
• CoveragePrinter
• CoverageStats
• CoverageSummary
• CustomInfo
• DGV
• DecipherCNVs
• DeletionPlot
• Delfin
• DensityPoint
• DownsampleFASTQ
• Drawing
• Ethnicity
• ExecutedProcess
• ExonCoverageStats
• ExtractFASTQ
• FASTAIndex
• FASTHRead
• FASTQDedupeActor
• FastQIdent
• Feature
• FindCompoundHets
• FormatMetaData
• GATKIntervalSummary
• GATKMeans
• GapAnnotator
• Gencode
• GeneAnnotationSource
• GeneCovStats
• GenomeInfo
• GenomeResource
• Genotype
• GnomADCNVDatabase
• GnomADHist
• Hash
• HeaderCat
• IRegion
• IlluminaFileNameParser
• IlluminaFileNameParser
• IlluminaFileNameParser.DIALECT
• IlluminaFileNameParser.DIALECT
• IlluminaSNPData
• LCSHPlot
• LiftOver
• LiftOver
• MeanCoverageEstimator
• MergePartitionedVCFs
• MultiCov
• OMIM
• OrderedPairActor
• OrderedPairReader
• OrderedPairWriter
• OverlapTracker
• PDF
• PairFilter
• PairFormatter
• PairScanner
• PairWriter
• Paired
• PairedReadComparator
• Pairs
• Palette
• PedTrio
• Pedigrees
• Phenotype
• PicardMetrics
• Pileup
• PileupIterator
• PileupIterator.Pileup
• PileupState
• PositionCounts
• PrefixTrie
• ProgressCounter
• QualCompactor
• RangeIndex
• RangeIndex.1
• RangeIndex.2
• RangeIndex.3
• RangeIndex.4
• RangedData
• ReadPair
• ReadRange
• ReadSpans
• ReadWindow
• RefGenes
• RegionIterator
• Regions
• RegulatingActor
• RegulatingActor.1
• RegulatingActor.2
• RepeatMotif
• ResolveRequest
• RestrictionEnzyme
• SAM
• SAMRecordCategory
• SampleCorrelationPlot
• SampleInfo
• SampleReadCount
• SampleType
• SamplesToPed
• ScannableRegion
• Schema
• Schema
• Sex
• Sex
• Sex
• SexKaryotyper
• SexKaryotyper.1
• ShearingKmerCounter
• SimpleLogFormatter
• SnpEffInfo
• SortFASTH10X
• SplitFASTQ10X
• SplitLiveFASTQ
• Subject
• TSV
• Table
• TargetedCNVAnnotator
• TargetedCoverageCalculator
• TestUpdate
• Time
• ToolBase
• Toolbase9
• TrieMismatchCosts
• TrieNode
• TrimBarcode10X
• TwoLeggedOAuthAPI
• VCFIndex
• VCFIndex.1
• VCFMergeSource
• VCFSimilarity
• VCFSummaryStats
• VCFWalkPosition
• VCFtoDB
• VCFtoPed
• VEPDiff
• VInfo
• VariantDB
• VariantDB
• VariantInfo
• VariantInjector
• VepConsequence
• XA
• XPos