QualCompactor

```
public class QualCompactor
extends java.lang.Object
```
A utility to compact quality scores by run length encoding them
Some specific optimisations are made to make things faster and more compact for the case of base quality scores:
We encode the length of the read as the first byte. To allow for values from 0 - 256 we subtract 127 from the value since Java only allows signed values. Encoding the length of the read saves
The length of runs is similarly encoded as value - 127, which allows any given run of bases to be up to 256 long.
Authors:
Simon Sadedin

Inherited Methods
Methods inherited from class	Name
`class java.lang.Object`	`java.lang.Object#wait(long), java.lang.Object#wait(long, int), java.lang.Object#wait(), java.lang.Object#equals(java.lang.Object), java.lang.Object#toString(), java.lang.Object#hashCode(), java.lang.Object#getClass(), java.lang.Object#notify(), java.lang.Object#notifyAll()`

Groovy Documentation

[Java] Class QualCompactor