CoverageBlock

Summary:
Property
Constructor
Method

| Detail:
Property
Constructor
Method

gngs.CoverageBlock

All Implemented Interfaces and Traits:

IRegion
```
@groovy.transform.CompileStatic
@groovy.transform.ToString(includeNames: true, excludes: [stats])
class CoverageBlock
extends java.lang.Object
implements IRegion
```
A run of contiguous bases within a band of coverage depth (eg: a run of low coverage bases).
Note that the start and end values are inclusive. That is, each base including both start and end values is below coverage threshold.
Authors:
Simon Sadedin

Properties Summary

Properties
Type	Name and description
`java.util.List<java.util.Map>`	`annotations`
`java.lang.String`	`chr`
`int`	`end`
`java.lang.String`	`id`
`java.lang.String`	`region`
`int`	`start`
`org.apache.commons.math3.stat.descriptive.DescriptiveStatistics`	`stats`

Constructor Summary

Constructors
Constructor and description
`CoverageBlock ()`

Methods Summary

Methods
Type Params	Return Type	Name and description
	`java.lang.Object`	`asType(java.lang.Class clazz)`
	`groovy.lang.IntRange`	`getRange()`
	`int`	`size()`

Inherited Methods Summary

Inherited Methods
Methods inherited from class	Name
`class java.lang.Object`	`java.lang.Object#wait(long), java.lang.Object#wait(long, int), java.lang.Object#wait(), java.lang.Object#equals(java.lang.Object), java.lang.Object#toString(), java.lang.Object#hashCode(), java.lang.Object#getClass(), java.lang.Object#notify(), java.lang.Object#notifyAll()`

- Property Detail
  - java.util.List<java.util.Map> annotations
  - java.lang.String chr
  - int end
  - java.lang.String id
  - java.lang.String region
  - int start
  - org.apache.commons.math3.stat.descriptive.DescriptiveStatistics stats
- Constructor Detail
  - CoverageBlock()
- Method Detail
  - java.lang.Object asType(java.lang.Class clazz)
  - @java.lang.Override groovy.lang.IntRange getRange()
  - int size()

Summary:
Property
Constructor
Method

| Detail:
Property
Constructor
Method

Groovy Documentation