VCFSummaryStats

Summary:
Property
Constructor
Method

| Detail:
Property
Constructor
Method

gngs.VCFSummaryStats

```
class VCFSummaryStats
extends java.lang.Object
```
A set of statistics summarizing how a VCF was filtered
Authors:
Simon Sadedin

Properties Summary

Properties
Type	Name and description
`int`	`excludeByCons`
`int`	`excludeByDiff`
`int`	`excludeByFilter`
`int`	`excludeByMaf`
`int`	`excludeByMasked`
`int`	`excludeByPreFilter`
`int`	`excludeByRepeat`
`int`	`excludeByTarget`
`int`	`excludeComplex`
`int`	`excludeNotPresent`
`int`	`total`
`int`	`totalIncluded`

Constructor Summary

Constructors
Constructor and description
`VCFSummaryStats ()`

Methods Summary

Methods
Type Params	Return Type	Name and description
	`java.lang.String`	`toString()`

Inherited Methods Summary

Inherited Methods
Methods inherited from class	Name
`class java.lang.Object`	`java.lang.Object#wait(long), java.lang.Object#wait(long, int), java.lang.Object#wait(), java.lang.Object#equals(java.lang.Object), java.lang.Object#toString(), java.lang.Object#hashCode(), java.lang.Object#getClass(), java.lang.Object#notify(), java.lang.Object#notifyAll()`

- Property Detail
  - int excludeByCons
  - int excludeByDiff
  - int excludeByFilter
  - int excludeByMaf
  - int excludeByMasked
  - int excludeByPreFilter
  - int excludeByRepeat
  - int excludeByTarget
  - int excludeComplex
  - int excludeNotPresent
  - int total
  - int totalIncluded
- Constructor Detail
  - VCFSummaryStats()
- Method Detail
  - @java.lang.Override java.lang.String toString()

Summary:
Property
Constructor
Method

| Detail:
Property
Constructor
Method

Groovy Documentation